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Get the MCMC samples of DLT rate

getProbSamples.Rd

This function gets the MCMC samples of DLT rate at the required doses given the toxicity model and MCMC samples of model parameters

Usage

getProbSamples(dose, mcmc_samples, model, ...)

# S4 method for class 'Samples,LogisticLogNormal'
getProbSamples(dose, mcmc_samples, model, ...)

Arguments

dose

non-negative numeric vector of doses that the DLT rate samples you want to retrieve

mcmc_samples

an object of class crmPack::Samples() from crmPack::mcmc(). This is MCMC samples of the model parameters

model

an toxicity model.

...

not used in this function

Value

for getProbSamples(mcmc_samples = Samples, model = LogisticLogNormal), a tibble containing the following columns:

  • alpha0, alpha1: sample values of the model parameters

  • dose: dose level

  • logit: logit value of given dose and model parameter samples

  • prob: mcmc samples of the DLT probability

Methods (by class)

  • getProbSamples(mcmc_samples = Samples, model = LogisticLogNormal): This function gets the MCMC samples of DLT rate at the required doses given the LogisticLognormal toxicity model and MCMC samples of model parameters